Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_1925Calcineurin-like phosphoesterase family protein. (313 aa)    
Predicted Functional Partners:
LO55_1926
pncC_: amidohydrolase, PncC family domain protein; Belongs to the CinA family.
  
    0.796
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.792
LO55_1924
Insulinase family protein.
       0.746
LO55_3861
Ankyrin repeat family protein.
   
 0.727
LO55_4230
Ankyrin repeat family protein.
   
 0.727
LO55_1584
Matrixin family protein.
    
 0.686
LO55_1922
CDF: cation diffusion facilitator transporter family protein.
    
  0.669
LO55_882
Kinase domain protein.
  
   
 0.603
LO55_1923
Bacterial regulatory, arsR family protein.
       0.579
LO55_2695
His Kinase A domain protein.
 
  
 0.536
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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