Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_2003Modulator of DNA gyrase family protein. (450 aa)    
Predicted Functional Partners:
LO55_310
Modulator of DNA gyrase family protein.
 
 
0.879
LO55_1142
Modulator of DNA gyrase family protein.
 
 
 0.867
LO55_1144
Modulator of DNA gyrase family protein.
 
 
 0.858
LO55_2004
Hypothetical protein.
       0.741
LO55_2002
Hypothetical protein; Belongs to the UPF0307 family.
  
    0.639
LO55_2001
Molyb_syn: molybdenum cofactor synthesis domain protein.
       0.633
LO55_2000
phospholipase/Carboxylesterase family protein.
     
 0.630
zapD
Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
  
     0.506
LO55_2005
doxX family protein.
       0.483
LO55_236
Hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.433
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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