Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LO55_2219 | LO55_2220 | LO55_2219 | LO55_2220 | Binding--dependent transport system inner membrane component family protein. | ABC transporter family protein. | 0.930 |
| LO55_2219 | LO55_2221 | LO55_2219 | LO55_2221 | Binding--dependent transport system inner membrane component family protein. | Putative tungstate ABC transporter, periplasmic tungstate-binding protein. | 0.978 |
| LO55_2219 | LO55_3416 | LO55_2219 | LO55_3416 | Binding--dependent transport system inner membrane component family protein. | Nitrate reductase delta subunit. | 0.725 |
| LO55_2219 | LO55_3418 | LO55_2219 | LO55_3418 | Binding--dependent transport system inner membrane component family protein. | Molybdopterin oxidoreductase family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.764 |
| LO55_2219 | LO55_3419 | LO55_2219 | LO55_3419 | Binding--dependent transport system inner membrane component family protein. | 4Fe-4S dicluster domain protein. | 0.731 |
| LO55_2219 | LO55_3421 | LO55_2219 | LO55_3421 | Binding--dependent transport system inner membrane component family protein. | formate-DH-gamm: formate dehydrogenase, gamma subunit. | 0.677 |
| LO55_2219 | LO55_3426 | LO55_2219 | LO55_3426 | Binding--dependent transport system inner membrane component family protein. | 4Fe-4S binding domain protein. | 0.691 |
| LO55_2219 | fdhD | LO55_2219 | LO55_2218 | Binding--dependent transport system inner membrane component family protein. | fdhD/NarQ family protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.947 |
| LO55_2219 | mobB | LO55_2219 | LO55_73 | Binding--dependent transport system inner membrane component family protein. | mobB: molybdopterin-guanine dinucleotide biosynthesis protein B. | 0.562 |
| LO55_2220 | LO55_2219 | LO55_2220 | LO55_2219 | ABC transporter family protein. | Binding--dependent transport system inner membrane component family protein. | 0.930 |
| LO55_2220 | LO55_2221 | LO55_2220 | LO55_2221 | ABC transporter family protein. | Putative tungstate ABC transporter, periplasmic tungstate-binding protein. | 0.886 |
| LO55_2220 | fdhD | LO55_2220 | LO55_2218 | ABC transporter family protein. | fdhD/NarQ family protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.806 |
| LO55_2221 | LO55_2219 | LO55_2221 | LO55_2219 | Putative tungstate ABC transporter, periplasmic tungstate-binding protein. | Binding--dependent transport system inner membrane component family protein. | 0.978 |
| LO55_2221 | LO55_2220 | LO55_2221 | LO55_2220 | Putative tungstate ABC transporter, periplasmic tungstate-binding protein. | ABC transporter family protein. | 0.886 |
| LO55_2221 | LO55_3416 | LO55_2221 | LO55_3416 | Putative tungstate ABC transporter, periplasmic tungstate-binding protein. | Nitrate reductase delta subunit. | 0.792 |
| LO55_2221 | LO55_3418 | LO55_2221 | LO55_3418 | Putative tungstate ABC transporter, periplasmic tungstate-binding protein. | Molybdopterin oxidoreductase family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.785 |
| LO55_2221 | LO55_3419 | LO55_2221 | LO55_3419 | Putative tungstate ABC transporter, periplasmic tungstate-binding protein. | 4Fe-4S dicluster domain protein. | 0.801 |
| LO55_2221 | LO55_3421 | LO55_2221 | LO55_3421 | Putative tungstate ABC transporter, periplasmic tungstate-binding protein. | formate-DH-gamm: formate dehydrogenase, gamma subunit. | 0.785 |
| LO55_2221 | LO55_3424 | LO55_2221 | LO55_3424 | Putative tungstate ABC transporter, periplasmic tungstate-binding protein. | Hypothetical protein. | 0.598 |
| LO55_2221 | LO55_3426 | LO55_2221 | LO55_3426 | Putative tungstate ABC transporter, periplasmic tungstate-binding protein. | 4Fe-4S binding domain protein. | 0.767 |
page 1 of 5