Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LO55_1669 | LO55_246 | LO55_1669 | LO55_246 | snoaL-like domain protein. | NHL repeat family protein. | 0.407 |
LO55_1995 | LO55_246 | LO55_1995 | LO55_246 | Cytochrome c family protein. | NHL repeat family protein. | 0.605 |
LO55_1995 | bkdA1 | LO55_1995 | LO55_3899 | Cytochrome c family protein. | 2-oxoisovalerate dehydrogenase subunit alpha. | 0.658 |
LO55_1995 | ccoP | LO55_1995 | LO55_3397 | Cytochrome c family protein. | Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.721 |
LO55_1995 | sldA | LO55_1995 | LO55_3292 | Cytochrome c family protein. | Glycerol dehydrogenase large subunit. | 0.741 |
LO55_246 | LO55_1669 | LO55_246 | LO55_1669 | NHL repeat family protein. | snoaL-like domain protein. | 0.407 |
LO55_246 | LO55_1995 | LO55_246 | LO55_1995 | NHL repeat family protein. | Cytochrome c family protein. | 0.605 |
LO55_246 | LO55_247 | LO55_246 | LO55_247 | NHL repeat family protein. | Hypothetical protein. | 0.943 |
LO55_246 | LO55_248 | LO55_246 | LO55_248 | NHL repeat family protein. | Flavin-binding monooxygenase-like family protein. | 0.445 |
LO55_246 | LO55_4312 | LO55_246 | LO55_4312 | NHL repeat family protein. | Iron-containing redox enzyme family protein. | 0.466 |
LO55_246 | LO55_83 | LO55_246 | LO55_83 | NHL repeat family protein. | NADPH-dependent FMN reductase family protein. | 0.408 |
LO55_246 | bkdA1 | LO55_246 | LO55_3899 | NHL repeat family protein. | 2-oxoisovalerate dehydrogenase subunit alpha. | 0.472 |
LO55_246 | ccoP | LO55_246 | LO55_3397 | NHL repeat family protein. | Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.605 |
LO55_246 | sldA | LO55_246 | LO55_3292 | NHL repeat family protein. | Glycerol dehydrogenase large subunit. | 0.532 |
LO55_247 | LO55_246 | LO55_247 | LO55_246 | Hypothetical protein. | NHL repeat family protein. | 0.943 |
LO55_247 | LO55_248 | LO55_247 | LO55_248 | Hypothetical protein. | Flavin-binding monooxygenase-like family protein. | 0.445 |
LO55_248 | LO55_246 | LO55_248 | LO55_246 | Flavin-binding monooxygenase-like family protein. | NHL repeat family protein. | 0.445 |
LO55_248 | LO55_247 | LO55_248 | LO55_247 | Flavin-binding monooxygenase-like family protein. | Hypothetical protein. | 0.445 |
LO55_4312 | LO55_246 | LO55_4312 | LO55_246 | Iron-containing redox enzyme family protein. | NHL repeat family protein. | 0.466 |
LO55_83 | LO55_246 | LO55_83 | LO55_246 | NADPH-dependent FMN reductase family protein. | NHL repeat family protein. | 0.408 |
page 1 of 2