Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LO55_2474 | LO55_2515 | LO55_2474 | LO55_2515 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.940 |
| LO55_2474 | LO55_2519 | LO55_2474 | LO55_2519 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Hypothetical protein. | 0.786 |
| LO55_2474 | LO55_267 | LO55_2474 | LO55_267 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.899 |
| LO55_2474 | LO55_272 | LO55_2474 | LO55_272 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | fliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family protein; Belongs to the sigma-70 factor family. | 0.923 |
| LO55_2474 | LO55_281 | LO55_2474 | LO55_281 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.692 |
| LO55_2474 | flgL-2 | LO55_2474 | LO55_289 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | flagell_flgL: flagellar hook-associated protein 3. | 0.936 |
| LO55_2474 | fliA | LO55_2474 | LO55_2445 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | RNA polymerase sigma factor, FliA/WhiG family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.949 |
| LO55_2474 | fliC | LO55_2474 | LO55_2518 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | B-type flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.871 |
| LO55_2515 | LO55_2474 | LO55_2515 | LO55_2474 | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.940 |
| LO55_2515 | LO55_2519 | LO55_2515 | LO55_2519 | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein. | 0.448 |
| LO55_2515 | LO55_267 | LO55_2515 | LO55_267 | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.672 |
| LO55_2515 | LO55_272 | LO55_2515 | LO55_272 | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | fliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family protein; Belongs to the sigma-70 factor family. | 0.778 |
| LO55_2515 | LO55_281 | LO55_2515 | LO55_281 | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.896 |
| LO55_2515 | flgL-2 | LO55_2515 | LO55_289 | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | flagell_flgL: flagellar hook-associated protein 3. | 0.920 |
| LO55_2515 | fliA | LO55_2515 | LO55_2445 | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | RNA polymerase sigma factor, FliA/WhiG family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.846 |
| LO55_2515 | fliC | LO55_2515 | LO55_2518 | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | B-type flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.941 |
| LO55_2519 | LO55_2474 | LO55_2519 | LO55_2474 | Hypothetical protein. | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.786 |
| LO55_2519 | LO55_2515 | LO55_2519 | LO55_2515 | Hypothetical protein. | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.448 |
| LO55_2519 | LO55_2520 | LO55_2519 | LO55_2520 | Hypothetical protein. | GGDEF: diguanylate cyclase domain protein. | 0.601 |
| LO55_2519 | LO55_267 | LO55_2519 | LO55_267 | Hypothetical protein. | Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.448 |
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