STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LO55_2631Beta-glucan synthesis-associated family protein. (593 aa)    
Predicted Functional Partners:
exoP
Exo-1,3/1,4-beta-glucanase; Belongs to the glycosyl hydrolase 3 family.
 
 
 0.757
LO55_1156
Glycosyltransferase 36 associated family protein.
    
  0.705
LO55_2812
Hypothetical protein.
   
    0.621
LO55_3707
Glycosyl hydrolase family 20, catalytic domain protein.
 
  
  0.577
LO55_2810
apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
   
    0.576
LO55_869
Glycosyl hydrolase family 20, catalytic domain protein.
 
  
  0.571
LO55_2632
Glycosyltransferase 36 family protein.
 
  
  0.562
LO55_2760
Glycosyltransferase like 2 family protein.
 
  
  0.541
LO55_4204
Hypothetical protein; Glycosyl hydrolase family 3 C-terminal domain protein.
 
 
 0.507
LO55_4400
GDSL-like Lipase/Acylhydrolase family protein.
  
 
 0.483
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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