STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliS-2fliS: flagellar protein FliS. (129 aa)    
Predicted Functional Partners:
flgL-2
flagell_flgL: flagellar hook-associated protein 3.
 
 
 0.995
flgL
flagell_flgL: flagellar hook-associated protein 3.
 
 
 0.993
LO55_250
Hypothetical protein; Bacterial flagellin C-terminal helical region family protein.
 
 
 0.993
LO55_252
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.993
LO55_254
FHIPEP family protein.
 
 
 0.993
fliC
B-type flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.992
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
 
 0.990
flgM
flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM.
 
 
 0.990
LO55_264
Hypothetical protein; Essential Yae1, N terminal family protein.
 
  
 0.989
LO55_267
Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.989
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.