STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ahpCPeroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)    
Predicted Functional Partners:
ahpF
ahpF: alkyl hydroperoxide reductase subunit F.
 
  
 0.992
LO55_2223
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.976
LO55_4831
ahpC/TSA family protein.
  
 0.975
LO55_474
ahpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.945
LO55_2172
Oxidoreductase.
  
 
 0.922
LO55_248
Flavin-binding monooxygenase-like family protein.
  
 
 0.922
LO55_346
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
 
 0.922
LO55_3525
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
 
 0.922
trxB
TRX_reduct: thioredoxin-disulfide reductase.
  
 
 0.922
LO55_3904
Thioredoxin family protein.
  
 0.917
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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