Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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[Homology]
Score
flgM-2flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM. (90 aa)    
Predicted Functional Partners:
LO55_272
fliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family protein; Belongs to the sigma-70 factor family.
  
 0.991
fliA
RNA polymerase sigma factor, FliA/WhiG family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
  
 0.980
LO55_276
flgN family protein.
  
  
 0.962
fliS
fliS: flagellar protein FliS.
  
 
 0.943
fliS-2
fliS: flagellar protein FliS.
  
 
 0.943
LO55_271
Flagellar basal body-associated FliL family protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.906
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.870
flgB-2
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.870
LO55_274
Membrane MotB of proton-channel complex MotA/MotB family protein.
  
  
 0.867
motA
motA1: flagellar motor stator protein MotA.
  
  
 0.859
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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