Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| LO55_2631 | LO55_2810 | Beta-glucan synthesis-associated family protein. | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.576 |
| LO55_2631 | LO55_2812 | Beta-glucan synthesis-associated family protein. | Hypothetical protein. | 0.621 |
| LO55_2631 | LO55_4186 | Beta-glucan synthesis-associated family protein. | Cytochrome c family protein. | 0.445 |
| LO55_2809 | LO55_2810 | Flavodoxin family protein. | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.861 |
| LO55_2809 | LO55_2811 | Flavodoxin family protein. | Hypothetical protein. | 0.881 |
| LO55_2809 | LO55_2812 | Flavodoxin family protein. | Hypothetical protein. | 0.862 |
| LO55_2809 | LO55_2813 | Flavodoxin family protein. | pepSY-associated TM helix family protein. | 0.850 |
| LO55_2809 | LO55_349 | Flavodoxin family protein. | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.583 |
| LO55_2809 | LO55_4543 | Flavodoxin family protein. | Pyridine nucleotide-disulfide oxidoreductase family protein. | 0.614 |
| LO55_2810 | LO55_2631 | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Beta-glucan synthesis-associated family protein. | 0.576 |
| LO55_2810 | LO55_2809 | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Flavodoxin family protein. | 0.861 |
| LO55_2810 | LO55_2811 | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Hypothetical protein. | 0.952 |
| LO55_2810 | LO55_2812 | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Hypothetical protein. | 0.957 |
| LO55_2810 | LO55_2813 | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | pepSY-associated TM helix family protein. | 0.856 |
| LO55_2810 | LO55_349 | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.518 |
| LO55_2810 | LO55_4117 | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.547 |
| LO55_2810 | LO55_4186 | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Cytochrome c family protein. | 0.675 |
| LO55_2810 | LO55_4543 | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Pyridine nucleotide-disulfide oxidoreductase family protein. | 0.442 |
| LO55_2810 | LO55_4652 | apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Hypothetical protein. | 0.454 |
| LO55_2811 | LO55_2809 | Hypothetical protein. | Flavodoxin family protein. | 0.881 |
page 1 of 3