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second shell of interactors
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LO55_2899Putative uracil DNA glycosylase; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. (260 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 
 0.891
xth
exoDNase_III: exodeoxyribonuclease III.
   
 0.789
xth-2
exoDNase_III: exodeoxyribonuclease III.
   
 0.789
xth-3
exoDNase_III: exodeoxyribonuclease III.
   
 0.789
dut
dUTP diphosphatase family protein; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
  
 
 0.723
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
   
 0.710
LO55_1215
Sel1 repeat family protein.
 
     0.675
LO55_4669
Uracil DNA glycosylase superfamily protein.
     
 0.616
LO55_3169
Hypothetical protein.
 
     0.593
LO55_2898
PEP_exosort: PEP-CTERM -sorting domain protein.
       0.554
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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