STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LO55_290Hypothetical protein. (347 aa)    
Predicted Functional Partners:
flgL-2
flagell_flgL: flagellar hook-associated protein 3.
  
 
 0.900
flgK-2
flgK_ends: flagellar hook-associated protein FlgK.
       0.784
flgG-2
flgG_G_neg: flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
   
   0.616
flgL
flagell_flgL: flagellar hook-associated protein 3.
  
 
 0.577
LO55_250
Hypothetical protein; Bacterial flagellin C-terminal helical region family protein.
  
 
 0.574
fliC
B-type flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.574
LO55_252
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.574
LO55_287
Rod binding family protein.
       0.570
flgH-2
Flagellar L-ring family protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.568
flgI-2
Flagellar P-ring family protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.568
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.