Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LO55_3002 | LO55_3003 | LO55_3002 | LO55_3003 | NYN domain protein. | Hypothetical protein. | 0.512 |
LO55_3003 | LO55_3002 | LO55_3003 | LO55_3002 | Hypothetical protein. | NYN domain protein. | 0.512 |
LO55_3003 | LO55_3004 | LO55_3003 | LO55_3004 | Hypothetical protein. | Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.535 |
LO55_3003 | sppA | LO55_3003 | LO55_3005 | Hypothetical protein. | sppA_67K: signal peptide peptidase SppA, 67K type. | 0.503 |
LO55_3004 | LO55_3003 | LO55_3004 | LO55_3003 | Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Hypothetical protein. | 0.535 |
LO55_3004 | sppA | LO55_3004 | LO55_3005 | Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | sppA_67K: signal peptide peptidase SppA, 67K type. | 0.756 |
sppA | LO55_3003 | LO55_3005 | LO55_3003 | sppA_67K: signal peptide peptidase SppA, 67K type. | Hypothetical protein. | 0.503 |
sppA | LO55_3004 | LO55_3005 | LO55_3004 | sppA_67K: signal peptide peptidase SppA, 67K type. | Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.756 |