Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LO55_3121 | LO55_3122 | LO55_3121 | LO55_3122 | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.836 |
LO55_3121 | LO55_3169 | LO55_3121 | LO55_3169 | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.920 |
LO55_3121 | LO55_3783 | LO55_3121 | LO55_3783 | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.925 |
LO55_3121 | LO55_3784 | LO55_3121 | LO55_3784 | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.925 |
LO55_3121 | LO55_3981 | LO55_3121 | LO55_3981 | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein; Plasmid replication region DNA-binding N-term family protein. | 0.925 |
LO55_3121 | LO55_4948 | LO55_3121 | LO55_4948 | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.925 |
LO55_3121 | cmk | LO55_3121 | LO55_43 | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Cmk: cytidylate kinase. | 0.872 |
LO55_3121 | panC | LO55_3121 | LO55_3120 | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.902 |
LO55_3121 | scpB | LO55_3121 | LO55_299 | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.999 |
LO55_3121 | smc | LO55_3121 | LO55_3558 | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.983 |
LO55_3122 | LO55_3121 | LO55_3122 | LO55_3121 | Hypothetical protein. | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.836 |
LO55_3122 | panC | LO55_3122 | LO55_3120 | Hypothetical protein. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.701 |
LO55_3169 | LO55_3121 | LO55_3169 | LO55_3121 | Hypothetical protein. | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.920 |
LO55_3169 | LO55_4948 | LO55_3169 | LO55_4948 | Hypothetical protein. | Hypothetical protein. | 0.721 |
LO55_3783 | LO55_3121 | LO55_3783 | LO55_3121 | Hypothetical protein. | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.925 |
LO55_3783 | LO55_3784 | LO55_3783 | LO55_3784 | Hypothetical protein. | Hypothetical protein. | 0.710 |
LO55_3783 | scpB | LO55_3783 | LO55_299 | Hypothetical protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.440 |
LO55_3784 | LO55_3121 | LO55_3784 | LO55_3121 | Hypothetical protein. | scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.925 |
LO55_3784 | LO55_3783 | LO55_3784 | LO55_3783 | Hypothetical protein. | Hypothetical protein. | 0.710 |
LO55_3784 | scpB | LO55_3784 | LO55_299 | Hypothetical protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.440 |
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