Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_3151Glycosyl hydrolase 10 family protein. (384 aa)    
Predicted Functional Partners:
LO55_3152
Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.889
LO55_3156
GDSL-like Lipase/Acylhydrolase family protein.
 
 
  0.813
LO55_4214
BNR/Asp-box repeat family protein.
  
 
  0.803
LO55_3821
GDSL-like Lipase/Acylhydrolase family protein.
  
 
  0.791
LO55_3159
Glycosyl hydrolase family protein; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.778
LO55_3644
Glycosyl hydrolases 43 family protein.
 
  
 0.773
LO55_3680
Hypothetical protein.
 
 
 
 0.749
gly43N-2
beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43N; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.744
LO55_3647
Hypothetical protein.
 
 
 
 0.744
yesW
Rhamnogalacturonan lyase yesW.
 
 
 
 0.741
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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