Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gph-3Phosphoglycolate phosphatase; Sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein; gph: sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein. (495 aa)    
Predicted Functional Partners:
LO55_3152
Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family.
 
    0.838
LO55_2060
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.672
LO55_3151
Glycosyl hydrolase 10 family protein.
 
     0.628
LO55_3317
tonB-Xanth-Caul: TonB-dependent receptor family protein.
  
     0.525
LO55_513
Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family.
 
    0.502
LO55_3154
Bacterial regulatory s, lacI family protein.
 
   
 0.496
LO55_4174
Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family.
 
    0.496
LO55_3809
tonB-Xanth-Caul: TonB-dependent receptor family protein.
  
     0.491
LO55_1290
Cupin-like domain protein.
  
     0.477
LO55_1293
Polysaccharide deacetylase family protein.
 
     0.477
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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