Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
czcB-2Cobalt-zinc-cadmium resistance protein CzcB. (414 aa)    
Predicted Functional Partners:
czcC-2
Cobalt-zinc-cadmium resistance protein CzcC.
 
  0.968
czcA-2
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.967
czcA
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.878
LO55_4139
2A0601: heavy metal efflux pump, CzcA family protein.
 
 0.875
LO55_3235
2A0601: heavy metal efflux pump, CzcA family protein.
 
 0.874
czcC
Cobalt-zinc-cadmium resistance protein CzcC.
 
  0.868
LO55_3257
2A0601: heavy metal efflux pump, CzcA family protein.
 
 0.864
LO55_4141
Outer membrane efflux family protein.
 
  0.856
LO55_3233
Outer membrane efflux family protein.
 
  0.848
LO55_4130
2A0601: heavy metal efflux pump, CzcA family protein.
 
 0.844
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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