Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_372Major Facilitator Superfamily protein. (432 aa)    
Predicted Functional Partners:
nirB
nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.994
nirD
nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit.
 
 
 0.992
LO55_369
NAD(P)-binding family protein.
 
 
 0.990
LO55_368
Molybdopterin oxidoreductase family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.988
LO55_1400
Nitronate monooxygenase family protein.
    
 0.857
LO55_2652
Nitronate monooxygenase family protein.
    
 0.857
LO55_4970
Dihydroorotate dehydrogenase family protein.
    
 0.857
LO55_4221
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
 
 0.791
LO55_5173
Fdh-alpha: formate dehydrogenase, alpha subunit.
  
 
 0.784
LO55_137
2Fe-2S iron-sulfur cluster binding domain protein.
     
 0.730
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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