STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LO55_382Beta-lactamase family protein. (349 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.701
ncs1
Ncs1: NCS1 nucleoside transporter family protein.
       0.678
LO55_385
Pyridine nucleotide-disulfide oxidoreductase family protein.
     
 0.525
LO55_3030
Beta-lactamase family protein.
  
     0.427
LO55_1414
Beta-lactamase family protein.
  
     0.424
LO55_3479
Esterase family protein.
  
     0.410
LO55_386
Aminotransferase class-III family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.409
LO55_81
Hypothetical protein; Glycosyl hydrolase family 3 N terminal domain protein.
 
 
 0.407
LO55_1631
Beta-lactamase family protein.
  
     0.400
LO55_4400
GDSL-like Lipase/Acylhydrolase family protein.
  
 
 0.400
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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