STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nadAQuinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily. (376 aa)    
Predicted Functional Partners:
nadC
nadC: nicotinate-nucleotide diphosphorylase; Belongs to the NadC/ModD family.
 
 
 0.999
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
 0.999
pnuC
NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC family protein.
 
  
 0.909
pnuC-2
NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC family protein.
 
  
 0.907
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
    0.883
cysE
cysE: serine O-acetyltransferase.
  
    0.874
LO55_820
Bacterial transferase hexapeptide family protein.
  
    0.874
sdhA
sdhA_forward: succinate dehydrogenase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
  
 0.785
LO55_3962
Putative membrane protein.
       0.718
LO55_3959
ABC transporter family protein.
       0.609
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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