STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LO55_3984Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. (197 aa)    
Predicted Functional Partners:
LO55_4831
ahpC/TSA family protein.
  
 0.882
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
   
 0.670
LO55_2223
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.655
LO55_2391
Hypothetical protein; C-terminal domain of 1-Cys peroxiredoxin family protein.
   
 0.645
LO55_474
ahpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.630
gshB
Glut_syn: glutathione synthase; Belongs to the prokaryotic GSH synthase family.
    
 0.581
LO55_1204
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
   
 
 0.554
LO55_1129
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
   
 
 0.553
ppsA-2
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
       0.550
LO55_1774
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
   
 
 0.545
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.