Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_4023enoyl-CoA hydratase/isomerase family protein. (266 aa)    
Predicted Functional Partners:
LO55_4025
Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein.
 
 0.972
LO55_3128
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
 0.965
LO55_4024
Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein.
 
 0.964
LO55_4001
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein.
 0.949
LO55_2008
Phenylacetic acid catabolic family protein.
  
 
 0.929
paaJ
PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit.
  
 
 0.924
LO55_2010
Phenylacetic acid catabolic family protein.
  
 
 0.919
LO55_4022
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
 
 0.909
LO55_2009
Phenylacetic acid degradation B family protein.
  
 
 0.900
paaN
paaN-DH: phenylacetic acid degradation protein paaN.
  
 0.900
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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