Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_4154merE family protein. (78 aa)    
Predicted Functional Partners:
merD
merD: mercuric resistence transcriptional repressor protein MerD.
       0.809
LO55_4155
EAL domain protein.
       0.801
merA
merA: mercury(II) reductase.
       0.729
merP
merP: mercuric transport protein periplasmic component.
       0.585
LO55_4150
merT mercuric transport family protein.
       0.582
LO55_4156
Resolvase, N terminal domain protein.
       0.496
merR
merR: Hg(II)-responsive transcriptional regulator.
       0.402
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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