Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_420923S rRNA m(5)C-1962 methyltransferase / SAM-dependent methyltransferase domain protein. (211 aa)    
Predicted Functional Partners:
LO55_4210
GDSL-like Lipase/Acylhydrolase family protein.
       0.639
LO55_4211
Glycosyl hydrolases 31 family protein; Belongs to the glycosyl hydrolase 31 family.
       0.522
LO55_4212
Glycosyl hydrolases 35 family protein.
       0.474
LO55_2379
FKBP-type peptidyl-prolyl cis-trans isomerase family protein.
  
     0.466
LO55_4213
Hypothetical protein; Glycosyl hydrolase family 65, N-terminal domain protein.
       0.444
LO55_4214
BNR/Asp-box repeat family protein.
       0.444
LO55_5098
Pseudouridine synthase family protein; Belongs to the pseudouridine synthase RsuA family.
 
 
 
 0.413
LO55_4244
enoyl-CoA hydratase/isomerase family protein.
  
   
 0.410
LO55_1822
THUMP domain protein; Belongs to the methyltransferase superfamily.
  
  
 0.406
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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