Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LO55_4233 | LO55_4237 | LO55_4233 | LO55_4237 | pilZ domain protein. | Aminomethyltransferase folate-binding domain protein; Belongs to the GcvT family. | 0.431 |
LO55_4233 | LO55_4238 | LO55_4233 | LO55_4238 | pilZ domain protein. | Hypothetical protein. | 0.428 |
LO55_4233 | LO55_4239 | LO55_4233 | LO55_4239 | pilZ domain protein. | NRDE family protein. | 0.431 |
LO55_4233 | holB | LO55_4233 | LO55_4234 | pilZ domain protein. | holB: DNA polymerase III, delta' subunit. | 0.841 |
LO55_4233 | mltG | LO55_4233 | LO55_4236 | pilZ domain protein. | yceG-like family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.544 |
LO55_4233 | tmk | LO55_4233 | LO55_4235 | pilZ domain protein. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.796 |
LO55_4237 | LO55_4233 | LO55_4237 | LO55_4233 | Aminomethyltransferase folate-binding domain protein; Belongs to the GcvT family. | pilZ domain protein. | 0.431 |
LO55_4237 | LO55_4238 | LO55_4237 | LO55_4238 | Aminomethyltransferase folate-binding domain protein; Belongs to the GcvT family. | Hypothetical protein. | 0.801 |
LO55_4237 | LO55_4239 | LO55_4237 | LO55_4239 | Aminomethyltransferase folate-binding domain protein; Belongs to the GcvT family. | NRDE family protein. | 0.801 |
LO55_4237 | holB | LO55_4237 | LO55_4234 | Aminomethyltransferase folate-binding domain protein; Belongs to the GcvT family. | holB: DNA polymerase III, delta' subunit. | 0.507 |
LO55_4237 | mltG | LO55_4237 | LO55_4236 | Aminomethyltransferase folate-binding domain protein; Belongs to the GcvT family. | yceG-like family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.592 |
LO55_4237 | tmk | LO55_4237 | LO55_4235 | Aminomethyltransferase folate-binding domain protein; Belongs to the GcvT family. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.433 |
LO55_4238 | LO55_4233 | LO55_4238 | LO55_4233 | Hypothetical protein. | pilZ domain protein. | 0.428 |
LO55_4238 | LO55_4237 | LO55_4238 | LO55_4237 | Hypothetical protein. | Aminomethyltransferase folate-binding domain protein; Belongs to the GcvT family. | 0.801 |
LO55_4238 | LO55_4239 | LO55_4238 | LO55_4239 | Hypothetical protein. | NRDE family protein. | 0.801 |
LO55_4238 | holB | LO55_4238 | LO55_4234 | Hypothetical protein. | holB: DNA polymerase III, delta' subunit. | 0.430 |
LO55_4238 | mltG | LO55_4238 | LO55_4236 | Hypothetical protein. | yceG-like family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.591 |
LO55_4238 | tmk | LO55_4238 | LO55_4235 | Hypothetical protein. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.430 |
LO55_4239 | LO55_4233 | LO55_4239 | LO55_4233 | NRDE family protein. | pilZ domain protein. | 0.431 |
LO55_4239 | LO55_4237 | LO55_4239 | LO55_4237 | NRDE family protein. | Aminomethyltransferase folate-binding domain protein; Belongs to the GcvT family. | 0.801 |
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