Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LO55_1788 | LO55_2060 | LO55_1788 | LO55_2060 | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.851 |
| LO55_1788 | dnaQ | LO55_1788 | LO55_4322 | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.633 |
| LO55_1788 | polA | LO55_1788 | LO55_597 | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
| LO55_1788 | rnhA | LO55_1788 | LO55_4323 | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | RNase H family protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.900 |
| LO55_1788 | rnhB | LO55_1788 | LO55_3602 | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | Ribonuclease HII family protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.724 |
| LO55_1788 | ssb | LO55_1788 | LO55_1608 | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | Single-stranded DNA-binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.574 |
| LO55_2060 | LO55_1788 | LO55_2060 | LO55_1788 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | 0.851 |
| LO55_2060 | polA | LO55_2060 | LO55_597 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.851 |
| LO55_2060 | rnhA | LO55_2060 | LO55_4323 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | RNase H family protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.714 |
| LO55_2060 | rnhB | LO55_2060 | LO55_3602 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonuclease HII family protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.515 |
| LO55_4324 | dnaQ | LO55_4324 | LO55_4322 | Methyltransferase domain protein. | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.637 |
| LO55_4324 | gloB | LO55_4324 | LO55_4325 | Methyltransferase domain protein. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.676 |
| LO55_4324 | rnhA | LO55_4324 | LO55_4323 | Methyltransferase domain protein. | RNase H family protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.900 |
| dnaQ | LO55_1788 | LO55_4322 | LO55_1788 | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | 0.633 |
| dnaQ | LO55_4324 | LO55_4322 | LO55_4324 | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Methyltransferase domain protein. | 0.637 |
| dnaQ | gloB | LO55_4322 | LO55_4325 | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.610 |
| dnaQ | polA | LO55_4322 | LO55_597 | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.690 |
| dnaQ | rnhA | LO55_4322 | LO55_4323 | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | RNase H family protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.966 |
| dnaQ | ssb | LO55_4322 | LO55_1608 | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Single-stranded DNA-binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.504 |
| flgC | flgC-2 | LO55_2473 | LO55_280 | flgC: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | flgC: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.630 |
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