Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lolDLiporeleasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. (224 aa)    
Predicted Functional Partners:
LO55_4369
lolCE: liporeleasing system, transmembrane, LolC/E family protein.
 
 0.990
LO55_4370
lolCE: liporeleasing system, transmembrane, LolC/E family protein.
 
 0.986
LO55_2574
ftsX-like permease family protein.
 0.979
LO55_4346
ftsX-like permease family protein.
  
 0.860
LO55_4367
tatD related DNase family protein.
 
 
   0.849
LO55_1125
ftsX-like permease family protein.
 
 0.837
LO55_880
ftsX-like permease family protein.
 
 0.835
LO55_1126
ftsX-like permease family protein.
 
 0.831
LO55_2646
ftsX-like permease family protein.
 
 0.830
LO55_879
ftsX-like permease family protein.
 
 0.824
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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