LO55_4608 protein (Massilia timonae) - STRING interaction network

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LO55_4608

VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (552 aa)

Predicted Functional Partners:

LO55_4609

0.939

LO55_1584

0.601

LO55_569

0.569

LO55_2590

0.552

LO55_4607

0.550

LO55_2604

0.549

LO55_1535

0.504

LO55_2332

0.482

LO55_3315

0.480

LO55_1022

0.475

Your Current Organism:

Massilia timonae

NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
LO55_1022	LO55_2590	MOSC domain protein.	ATPase_P-type: HAD ATPase, P-type, IC family protein.	0.607
LO55_1022	LO55_4608	MOSC domain protein.	VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.475
LO55_1535	LO55_2604	Hypothetical protein.	impB/mucB/samB family protein.	0.775
LO55_1535	LO55_4608	Hypothetical protein.	VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.504
LO55_1584	LO55_2332	Matrixin family protein.	NHL repeat family protein.	0.673
LO55_1584	LO55_3315	Matrixin family protein.	Hypothetical protein; Insecticide toxin TcdB middle/N-terminal region family protein.	0.673
LO55_1584	LO55_4608	Matrixin family protein.	VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.601
LO55_2332	LO55_1584	NHL repeat family protein.	Matrixin family protein.	0.673
LO55_2332	LO55_4608	NHL repeat family protein.	VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.482
LO55_2590	LO55_1022	ATPase_P-type: HAD ATPase, P-type, IC family protein.	MOSC domain protein.	0.607
LO55_2590	LO55_4608	ATPase_P-type: HAD ATPase, P-type, IC family protein.	VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.552
LO55_2604	LO55_1535	impB/mucB/samB family protein.	Hypothetical protein.	0.775
LO55_2604	LO55_4608	impB/mucB/samB family protein.	VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.549
LO55_2604	LO55_4609	impB/mucB/samB family protein.	DEAD_2 family protein.	0.503
LO55_3315	LO55_1584	Hypothetical protein; Insecticide toxin TcdB middle/N-terminal region family protein.	Matrixin family protein.	0.673
LO55_3315	LO55_4608	Hypothetical protein; Insecticide toxin TcdB middle/N-terminal region family protein.	VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.480
LO55_4607	LO55_4608	Hypothetical protein.	VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.550
LO55_4607	LO55_4609	Hypothetical protein.	DEAD_2 family protein.	0.550
LO55_4608	LO55_1022	VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	MOSC domain protein.	0.475
LO55_4608	LO55_1535	VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	Hypothetical protein.	0.504

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