Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LO55_1788 | LO55_3128 | LO55_1788 | LO55_3128 | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | 0.774 |
| LO55_1788 | secA | LO55_1788 | LO55_469 | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.972 |
| LO55_1788 | secG | LO55_1788 | LO55_2959 | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.426 |
| LO55_1788 | secY | LO55_1788 | LO55_1072 | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.589 |
| LO55_2284 | rplW | LO55_2284 | LO55_1090 | ompA-like transmembrane domain protein. | Ribosomal L23 family protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.964 |
| LO55_2284 | rpmC | LO55_2284 | LO55_1084 | ompA-like transmembrane domain protein. | L29: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.953 |
| LO55_2284 | secA | LO55_2284 | LO55_469 | ompA-like transmembrane domain protein. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.968 |
| LO55_2284 | secY | LO55_2284 | LO55_1072 | ompA-like transmembrane domain protein. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.782 |
| LO55_2837 | rplW | LO55_2837 | LO55_1090 | Helix-turn-helix domain protein. | Ribosomal L23 family protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.951 |
| LO55_2837 | rpmC | LO55_2837 | LO55_1084 | Helix-turn-helix domain protein. | L29: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.951 |
| LO55_2837 | secA | LO55_2837 | LO55_469 | Helix-turn-helix domain protein. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.954 |
| LO55_3128 | LO55_1788 | LO55_3128 | LO55_1788 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | 0.774 |
| LO55_3128 | rplW | LO55_3128 | LO55_1090 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Ribosomal L23 family protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.756 |
| LO55_3128 | rpmC | LO55_3128 | LO55_1084 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | L29: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.728 |
| LO55_3128 | secA | LO55_3128 | LO55_469 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.964 |
| rplW | LO55_2284 | LO55_1090 | LO55_2284 | Ribosomal L23 family protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | ompA-like transmembrane domain protein. | 0.964 |
| rplW | LO55_2837 | LO55_1090 | LO55_2837 | Ribosomal L23 family protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | Helix-turn-helix domain protein. | 0.951 |
| rplW | LO55_3128 | LO55_1090 | LO55_3128 | Ribosomal L23 family protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | 0.756 |
| rplW | rpmC | LO55_1090 | LO55_1084 | Ribosomal L23 family protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | L29: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
| rplW | secA | LO55_1090 | LO55_469 | Ribosomal L23 family protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.952 |
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