STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_474ahpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (167 aa)    
Predicted Functional Partners:
LO55_1411
Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family.
   
 0.904
LO55_578
Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family.
   
 0.904
LO55_1129
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
  
  
  0.879
gshB
Glut_syn: glutathione synthase; Belongs to the prokaryotic GSH synthase family.
     
 0.871
LO55_2893
chaC-like family protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
  
  
  0.870
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
   
 0.863
LO55_2391
Hypothetical protein; C-terminal domain of 1-Cys peroxiredoxin family protein.
   
 0.855
LO55_1204
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
     
  0.851
LO55_1774
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
     
  0.851
LO55_1787
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein; Belongs to the GST superfamily.
     
  0.851
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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