STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsBArsenite/antimonite efflux pump membrane family protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. (426 aa)    
Predicted Functional Partners:
LO55_4742
Low molecular weight phosphotyrosine phosphatase family protein.
 
   
 0.878
arsH
resist_ArsH: arsenical resistance protein ArsH.
 
  
 0.858
LO55_4741
Bacterial regulatory, arsR family protein.
  
  
 0.727
LO55_4745
Acetyltransferase family protein.
     
 0.658
LO55_3039
Bacterial regulatory, arsR family protein.
  
  
 0.607
LO55_4740
Dass: transporter, divalent anion:Na+ symporter family protein.
     
 0.566
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
    0.502
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.470
LO55_3434
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
 
   
 0.433
LO55_962
Bacterial regulatory, arsR family protein.
  
  
 0.425
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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