STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsHresist_ArsH: arsenical resistance protein ArsH. (238 aa)    
Predicted Functional Partners:
LO55_4742
Low molecular weight phosphotyrosine phosphatase family protein.
 
  
 0.865
arsB
Arsenite/antimonite efflux pump membrane family protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
 
  
 0.858
LO55_4741
Bacterial regulatory, arsR family protein.
 
   
 0.757
LO55_3339
Flavodoxin family protein.
  
  
 0.719
LO55_4745
Acetyltransferase family protein.
     
 0.706
LO55_3328
2Fe-2S iron-sulfur cluster binding domain protein.
 
  
  0.698
LO55_2223
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
 0.688
LO55_137
2Fe-2S iron-sulfur cluster binding domain protein.
    
  0.655
LO55_2012
2Fe-2S iron-sulfur cluster binding domain protein.
    
  0.655
LO55_816
FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein.
 
 0.646
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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