Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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mdcBtriphosphoribosyl-dephospho-CoA synthase MdcB; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family. (295 aa)    
Predicted Functional Partners:
mdcC
Malonate_delta: malonate decarboxylase acyl carrier protein.
 
  
 0.995
mdcG
malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase.
 
  
  0.976
mdcA
mdcA: malonate decarboxylase, alpha subunit.
 
  
 0.976
mdcD
Malonate_beta: biotin-independent malonate decarboxylase, beta subunit.
 
  
 0.974
mdcE
Malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit.
 
     0.959
LO55_4764
Acyl transferase domain protein.
 
    0.930
LO55_4630
hpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.874
LO55_2774
hpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.820
LO55_1103
C-C Bond Lyase of the TIM-Barrel fold family protein.
  
  
 0.796
LO55_4771
Citrate transporter family protein.
 
  
 0.754
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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