Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_5019Phage head-tail joining family protein. (100 aa)    
Predicted Functional Partners:
LO55_5020
Hypothetical protein.
  
 
 0.941
LO55_5024
major_cap_HK97: phage major capsid protein, HK97 family.
  
 
 0.903
LO55_5026
portal_HK97: phage portal protein, HK97 family.
  
 
 0.830
LO55_5018
Bacteriophage HK97-gp10, tail-component family protein.
  
    0.805
LO55_5017
Hypothetical protein.
       0.800
LO55_3648
Glycosyl hydrolases 28 family protein; Belongs to the glycosyl hydrolase 28 family.
  
 
 0.742
LO55_3810
Glycosyl hydrolases 28 family protein; Belongs to the glycosyl hydrolase 28 family.
  
 
 0.742
LO55_5010
Hypothetical protein.
  
 
 0.742
LO55_4786
Phage Tail Collar domain protein.
  
   0.730
LO55_5016
Phage tail family protein.
       0.593
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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