STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LO55_5132Glycosyl transferases group 1 family protein. (406 aa)    
Predicted Functional Partners:
LO55_5125
GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.830
LO55_3035
Alpha amylase, catalytic domain protein.
   
 0.829
LO55_1344
Alpha/beta hydrolase family protein.
 
 
 
 0.810
LO55_5131
Hypothetical protein.
 
     0.805
LO55_1349
EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein.
 
  
 0.743
ggpS
gluc_glyc_Psyn: glucosylglycerol-phosphate synthase.
    
 0.707
glf
UDP-GALP_mutase: UDP-galactopyranose mutase.
  
 
 0.694
LO55_5130
Glycosyl transferases group 1 family protein.
 
     0.675
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.669
LO55_5148
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.660
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.