Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
LO55_608Acetyltransferase family protein. (190 aa)    
Predicted Functional Partners:
LO55_607
Pyridine nucleotide-disulfide oxidoreductase family protein.
 
     0.954
LO55_605
Nitrilase, sll0784 family; nitrile_sll0784: nitrilase, sll0784 family.
 
  
  0.899
LO55_604
Radical SAM superfamily protein.
 
   
 0.898
LO55_606
dsrE/DsrF-like family protein.
 
   
 0.883
LO55_602
Hypothetical protein.
 
     0.874
LO55_603
Hypothetical protein; AIR synthase related, N-terminal domain protein.
 
     0.873
LO55_609
Aminotransferase class I and II family protein.
 
     0.764
LO55_1548
Glutamine amidotransferases class-II family protein.
     
  0.713
argA
N-Ac-Glu-synth: amino-acid N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily.
    
 0.701
acs
acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.655
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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