Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_697Sporulation related domain protein. (247 aa)    
Predicted Functional Partners:
coaX
Pantothenate kinase, type III family protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
 
   
 0.832
LO55_693
Sporulation related domain protein.
 
     0.818
LO55_695
birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase.
       0.812
LO55_694
Short chain dehydrogenase family protein.
       0.773
LO55_926
SMC s Flexible Hinge domain protein.
  
     0.741
LO55_928
Hypothetical protein.
  
     0.739
fimV
fimV_core: FimV N-terminal domain.
  
     0.729
LO55_3560
Hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.719
LO55_927
Hypothetical protein.
  
     0.719
LO55_1223
STAS domain protein.
  
     0.715
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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