Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gshBGlut_syn: glutathione synthase; Belongs to the prokaryotic GSH synthase family. (314 aa)    
Predicted Functional Partners:
gshA-2
gshA_ferroox: glutamate--cysteine ligase.
 
  
 0.966
gshA
Glu_cys_ligase: glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
  
 
 0.946
pepA
Hypothetical protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.913
LO55_1774
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
 
  
 0.896
LO55_1548
Glutamine amidotransferases class-II family protein.
    
 0.891
LO55_2037
Carboxylate-amine ligase, YbdK family protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.886
LO55_3929
Carboxylate-amine ligase, YbdK family protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.886
LO55_1411
Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family.
    
 0.878
LO55_578
Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family.
    
 0.878
LO55_1204
Hypothetical protein; Glutathione S-transferase, N-terminal domain protein.
    
 0.877
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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