Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ssuDAlkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (383 aa)    
Predicted Functional Partners:
ssuE
FMN_reduc_SsuE: FMN reductase.
 
 0.995
LO55_817
ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.
 
 
 0.985
LO55_818
Binding--dependent transport system inner membrane component family protein.
 
 
 0.968
LO55_2920
Binding--dependent transport system inner membrane component family protein.
 
 
 0.922
LO55_2918
NMT1-like family protein.
 
 
 0.916
LO55_2919
ABC transporter family protein.
 
 
 0.907
LO55_816
FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein.
 
  
 
0.887
LO55_3339
Flavodoxin family protein.
  
  
 0.874
LO55_2809
Flavodoxin family protein.
  
  
  0.868
LO55_812
Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein.
 
     0.864
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
Server load: low (16%) [HD]