Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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LO55_816FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein. (463 aa)    
Predicted Functional Partners:
LO55_817
ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.
 
 
 0.982
ssuE
FMN_reduc_SsuE: FMN reductase.
 
 0.968
LO55_818
Binding--dependent transport system inner membrane component family protein.
 
 
 0.936
LO55_812
Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein.
 
     0.916
ssuD
Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
  
 
0.887
LO55_2918
NMT1-like family protein.
 
 
 0.854
LO55_2886
Isochorismatase family protein.
 
 
  0.843
LO55_2920
Binding--dependent transport system inner membrane component family protein.
 
 
 0.843
LO55_814
Binding--dependent transport system inner membrane component family protein.
      0.832
LO55_815
NLPA lipofamily protein; Belongs to the nlpA lipoprotein family.
       0.794
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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