Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LO55_843Haloacid dehalogenase-like hydrolase family protein. (246 aa)    
Predicted Functional Partners:
LO55_582
4Fe-4S dicluster domain protein.
    
 0.853
LO55_583
FAD binding domain protein.
    
 0.853
hppr
Hydroxyphenylpyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.851
LO55_2431
HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein.
     
  0.850
gph-4
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
     
  0.850
LO55_1501
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein.
    
 0.848
LO55_1001
4Fe-4S dicluster domain protein.
    
 0.730
pheA
CM_P2: chorismate mutase.
    
 0.719
LO55_3072
FAD binding domain protein.
    
 0.701
LO55_584
FAD binding domain protein.
    
 0.701
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.