Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_911Molybdopterin-binding domain of aldehyde dehydrogenase family protein. (732 aa)    
Predicted Functional Partners:
LO55_913
[2Fe-2S] binding domain protein.
 0.997
LO55_3855
[2Fe-2S] binding domain protein.
 0.991
LO55_912
FAD binding domain in molybdopterin dehydrogenase family protein.
 
 0.986
LO55_919
[2Fe-2S] binding domain protein.
 0.985
LO55_4457
[2Fe-2S] binding domain protein.
 0.984
LO55_3747
[2Fe-2S] binding domain protein.
 0.965
LO55_2799
[2Fe-2S] binding domain protein.
 0.954
LO55_3748
FAD binding domain in molybdopterin dehydrogenase family protein.
 0.952
LO55_3854
FAD binding domain in molybdopterin dehydrogenase family protein.
 
 0.951
LO55_4458
FAD binding domain in molybdopterin dehydrogenase family protein.
 
 0.951
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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