STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LO55_929Hypothetical protein. (253 aa)    
Predicted Functional Partners:
LO55_930
Hypothetical protein.
 
    
0.835
LO55_1584
Matrixin family protein.
   
 0.809
LO55_4751
ftsK/SpoIIIE family protein.
    
 
 0.778
LO55_2773
Putative exported signal peptide protein.
  
     0.762
LO55_2668
Putative transmembrane protein.
  
  
 0.756
LO55_3560
Hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.755
LO55_1957
Putative membrane protein.
  
   
 0.737
LO55_1690
vanZ like family protein.
  
     0.736
LO55_2915
Hypothetical protein.
  
     0.734
LO55_1217
Gram-negative porin family protein.
  
     0.733
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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