LO55_958 protein (Massilia timonae) - STRING interaction network

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Your Current Organism:

Massilia timonae

NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LO55_1548	LO55_958	LO55_1548	LO55_958	Glutamine amidotransferases class-II family protein.	gyrI-like small molecule binding domain protein.	0.805
LO55_1548	rpoC	LO55_1548	LO55_1171	Glutamine amidotransferases class-II family protein.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.540
LO55_4472	LO55_958	LO55_4472	LO55_958	Kinase domain protein.	gyrI-like small molecule binding domain protein.	0.743
LO55_958	LO55_1548	LO55_958	LO55_1548	gyrI-like small molecule binding domain protein.	Glutamine amidotransferases class-II family protein.	0.805
LO55_958	LO55_4472	LO55_958	LO55_4472	gyrI-like small molecule binding domain protein.	Kinase domain protein.	0.743
LO55_958	rpoA	LO55_958	LO55_1066	gyrI-like small molecule binding domain protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.908
LO55_958	rpoB	LO55_958	LO55_1172	gyrI-like small molecule binding domain protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.824
LO55_958	rpoC	LO55_958	LO55_1171	gyrI-like small molecule binding domain protein.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.807
LO55_958	rpoD	LO55_958	LO55_2160	gyrI-like small molecule binding domain protein.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.736
LO55_958	rpoD-2	LO55_958	LO55_4794	gyrI-like small molecule binding domain protein.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.736
LO55_958	rpoH	LO55_958	LO55_512	gyrI-like small molecule binding domain protein.	Alternative sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.	0.736
LO55_958	rpoS	LO55_958	LO55_2829	gyrI-like small molecule binding domain protein.	RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.	0.736
LO55_958	rpoZ	LO55_958	LO55_2526	gyrI-like small molecule binding domain protein.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.807
rpoA	LO55_958	LO55_1066	LO55_958	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	gyrI-like small molecule binding domain protein.	0.908
rpoA	rpoB	LO55_1066	LO55_1172	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoA	rpoC	LO55_1066	LO55_1171	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoA	rpoD	LO55_1066	LO55_2160	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.956
rpoA	rpoD-2	LO55_1066	LO55_4794	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.956
rpoA	rpoH	LO55_1066	LO55_512	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Alternative sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.	0.944
rpoA	rpoS	LO55_1066	LO55_2829	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.	0.932

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