STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900070355_00289Unannotated protein. (178 aa)    
Predicted Functional Partners:
GCA_900070355_00290
Unannotated protein.
 
 0.999
GCA_900070355_00291
Unannotated protein.
 
 
 0.995
GCA_900070355_00295
Unannotated protein.
  
 
 0.992
GCA_900070355_00294
Unannotated protein.
  
  
 0.957
GCA_900070355_02482
Unannotated protein.
     
 0.953
GCA_900070355_02097
Unannotated protein.
     
 0.931
GCA_900070355_00293
Unannotated protein.
  
  
 0.921
GCA_900070355_00471
Unannotated protein.
  
 
 0.918
GCA_900070355_00039
Unannotated protein.
     
 0.912
GCA_900070355_00292
Unannotated protein.
  
  
 0.900
Your Current Organism:
Devriesea agamarum
NCBI taxonomy Id: 472569
Other names: CCUG 55056, D. agamarum, Devriesea agamarum Martel et al. 2008, JCM 16028, LMG 24257, LMG:24257, strain IMP2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.