Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001743465_01777 | HA41_01180 | GCA_001743465_01777 | GCA_001743465_02272 | Unannotated protein. | Unannotated protein; Belongs to the ribF family. | 0.936 |
GCA_001743465_01777 | HA41_03415 | GCA_001743465_01777 | GCA_001743465_00291 | Unannotated protein. | Unannotated protein. | 0.652 |
GCA_001743465_01777 | HA41_06880 | GCA_001743465_01777 | GCA_001743465_00124 | Unannotated protein. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.994 |
GCA_001743465_01777 | HA41_10545 | GCA_001743465_01777 | GCA_001743465_03420 | Unannotated protein. | Unannotated protein. | 0.651 |
GCA_001743465_01777 | HA41_18475 | GCA_001743465_01777 | GCA_001743465_00841 | Unannotated protein. | Unannotated protein. | 0.992 |
GCA_001743465_01777 | ribA | GCA_001743465_01777 | GCA_001743465_02877 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate. | 0.981 |
GCA_001743465_01777 | ribB | GCA_001743465_01777 | GCA_001743465_01556 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.990 |
GCA_001743465_01777 | ribH | GCA_001743465_01777 | GCA_001743465_00125 | Unannotated protein. | Unannotated protein; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.764 |
HA41_01180 | GCA_001743465_01777 | GCA_001743465_02272 | GCA_001743465_01777 | Unannotated protein; Belongs to the ribF family. | Unannotated protein. | 0.936 |
HA41_01180 | HA41_03415 | GCA_001743465_02272 | GCA_001743465_00291 | Unannotated protein; Belongs to the ribF family. | Unannotated protein. | 0.958 |
HA41_01180 | HA41_06880 | GCA_001743465_02272 | GCA_001743465_00124 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.884 |
HA41_01180 | HA41_10545 | GCA_001743465_02272 | GCA_001743465_03420 | Unannotated protein; Belongs to the ribF family. | Unannotated protein. | 0.956 |
HA41_01180 | HA41_10705 | GCA_001743465_02272 | GCA_001743465_03389 | Unannotated protein; Belongs to the ribF family. | Unannotated protein. | 0.958 |
HA41_01180 | HA41_18475 | GCA_001743465_02272 | GCA_001743465_00841 | Unannotated protein; Belongs to the ribF family. | Unannotated protein. | 0.980 |
HA41_01180 | ribA | GCA_001743465_02272 | GCA_001743465_02877 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate. | 0.675 |
HA41_01180 | ribB | GCA_001743465_02272 | GCA_001743465_01556 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.748 |
HA41_01180 | ribH | GCA_001743465_02272 | GCA_001743465_00125 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.956 |
HA41_03415 | GCA_001743465_01777 | GCA_001743465_00291 | GCA_001743465_01777 | Unannotated protein. | Unannotated protein. | 0.652 |
HA41_03415 | HA41_01180 | GCA_001743465_00291 | GCA_001743465_02272 | Unannotated protein. | Unannotated protein; Belongs to the ribF family. | 0.958 |
HA41_03415 | HA41_06880 | GCA_001743465_00291 | GCA_001743465_00124 | Unannotated protein. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.966 |
page 1 of 4