STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HA41_08300Unannotated protein. (180 aa)    
Predicted Functional Partners:
bamA
Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery.
    
 
 0.773
HA41_06475
Unannotated protein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
  
 0.744
HA41_11530
Unannotated protein.
  
    0.489
GCA_001743465_02391
Unannotated protein.
  
     0.477
HA41_02785
Unannotated protein.
  
     0.476
GCA_001743465_01277
Unannotated protein.
   
  
 0.463
HA41_16340
Unannotated protein; Belongs to the MtfA family.
  
     0.437
HA41_16815
Unannotated protein.
  
    0.434
HA41_04360
Unannotated protein.
  
     0.433
HA41_03895
Unannotated protein; Belongs to the P-Pant transferase superfamily.
  
     0.428
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.