STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HA41_17965Unannotated protein. (194 aa)    
Predicted Functional Partners:
HA41_17970
Unannotated protein; Belongs to the uracil-DNA glycosylase (UDG) superfamily. TDG/mug family.
 
     0.824
HA41_17960
Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.689
HA41_02950
Unannotated protein.
  
     0.562
HA41_00235
Unannotated protein.
  
     0.559
HA41_17585
Unannotated protein.
  
     0.547
GCA_001743465_02654
Unannotated protein.
  
 
   0.492
pth
Unannotated protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.442
HA41_17760
Unannotated protein.
  
     0.431
GCA_001743465_01374
Unannotated protein.
  
     0.413
HA41_19385
Unannotated protein.
  
     0.400
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.