STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001743465_02940Unannotated protein. (299 aa)    
Predicted Functional Partners:
HA41_09075
Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
 0.797
HA41_19075
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.760
HA41_14480
Unannotated protein.
   
    0.719
HA41_13345
Unannotated protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.710
HA41_08950
Unannotated protein.
       0.702
HA41_07655
Unannotated protein.
   
    0.667
HA41_07810
Unannotated protein.
 
0.615
HA41_06115
Unannotated protein.
   
 
 0.606
HA41_06905
Unannotated protein.
 
0.599
GCA_001743465_03046
Unannotated protein.
 
0.597
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.