STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HA41_14660Unannotated protein. (319 aa)    
Predicted Functional Partners:
HA41_14665
Unannotated protein.
 
     0.923
HA41_14670
Unannotated protein.
 
     0.876
maeA
Unannotated protein.
  
  
 0.861
mdcC
Unannotated protein; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
 
     0.857
HA41_14655
Unannotated protein.
 
     0.815
HA41_14650
Unannotated protein.
 
     0.756
GCA_001743465_03201
Unannotated protein.
 
     0.744
HA41_07130
Unannotated protein.
 
     0.731
HA41_14675
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.676
GCA_001743465_04285
Unannotated protein.
 
     0.560
Your Current Organism:
Pantoea conspicua
NCBI taxonomy Id: 472705
Other names: CDC 3527-71, DSM 24241, LMG 24534, LMG:24534, P. conspicua, Pantoea conspicua Brady et al. 2010, Pantoea sp. LMG 24534, Pantoea sp. R-35496, strain BD 805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.